Sequence Details

BLAST PRIMER
Symbol
hsa_CD44_0006500
Sequence Length
216 nt
GC Content
0.4630
CAGGCUGGGAGCCAAAUGAAGAAAAUGAAGAUGAAAGAGACAGACACCUCAGUUUUUCUGGAUCAGGCAUUGAUGAUGAUGAAGAUUUUAUCUCCAGCACCAUUUCAACCACACCACGGGCUUUUGACCACACAAAACAGAACCAGGACUGGACCCAGUGGAACCCAAGCCAUUCAAAUCCGGAAGUGCUACUUCAGACAACCACAAGGAUGACUG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-36.10 kcal/mol
Ensemble Metrics
Free Energy: -39.89
Frequency: 0.0021
Diversity: 81.75
Structure Visualization
Structure Prediction
MFE Structure Prediction
..((((...)))).......................(((........)))(((.(((((((((..((....((((.((.((.((((...)))).)).)).))))....))........(((((....((((......(((........)))......)))).....)))))......))))))))).)))....(((.((.((....)).)).)))
Thermodynamic Ensemble Prediction
.,(((((((.{((...{..{{,,,,{,.,{.{{...{{,.....,,.}}},}}}}}))},.||,.||}.,,{,{(,{({{{.,,,,.}})))},)),},.||||,,..,,...{{..{(({(({{(.,,...,,,,.{||..,,.,,.}))}...,.))))..}}}}})))......,{{{.||||{},,.}},|{{.{{.{{....)),)}.,}}
Back