Sequence Details

BLAST PRIMER
Symbol
hsa_CD44_0007700
Sequence Length
234 nt
GC Content
0.4915
UUUCAACCACACCACGGGCUUUUGACCACACAAAACAGAACCAGGACUGGACCCAGUGGAACCCAAGCCAUUCAAAUCCGGAAGUGCUACUUCAGACAACCACAAGGAUGACUGCAGAUGUAGACAGAAAUGGCACCACUGCUUAUGAAGGAAACUGGAACCCAGAAGCACACCCUCCCCUCAUUCACCAUGAGCAUCAUGAGGAAGAAGAGACCCCACAUUCUACAAGCACAA

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-38.30 kcal/mol
Ensemble Metrics
Free Energy: -42.35
Frequency: 0.0014
Diversity: 56.57
Structure Visualization
Structure Prediction
MFE Structure Prediction
......((.......))(((((((.((((......(((........)))......))))...(((..((.((((.(..(((..((((((.(((...((.((....)).)).((((....))))...))).))))))..)))..).))))))....)))....))))))).....(((...((.(((..(((((...)))))..))))).)))......................
Thermodynamic Ensemble Prediction
.{{{............(((((,,{.((((......(((........)))......)))).....}}})).,,......,|)},(((((.{(,(((.((.((....)).)).))).}}.{({{{{..,...||{||....}}||,.,,..||...((((...)))).,,,.....{{{..,((.(((..(((((...)))))..)))},.)}).........)))})})))))..
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