Sequence Details

BLAST PRIMER
Symbol
hsa_CD44_0008100
Sequence Length
249 nt
GC Content
0.4940
CAGAUGUAGACAGAAAUGGCACCACUGCUUAUGAAGGAAACUGGAACCCAGAAGCACACCCUCCCCUCAUUCACCAUGAGCAUCAUGAGGAAGAAGAGACCCCACAUUCUACAAGCACAAUCCAGGCAACUCCUAGUAGUACAACGGAAGAAACAGCUACCCAGAAGGAACAGUGGUUUGGCAACAGAUGGCAUGAGGGAUAUCGCCAAACACCCAAAGAAGACUCCCAUUCGACAACAGGGACAGCUG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-40.30 kcal/mol
Ensemble Metrics
Free Energy: -45.14
Frequency: 0.0004
Diversity: 60.67
Structure Visualization
Structure Prediction
MFE Structure Prediction
(....)(((.......((((.....(((((..........((((...))))))))).......(((((((((..(((((...)))))..))((((...........))))....((.(......)))...((((.(((((...............))))).....))))...((.(((((....))))).))))))))).....))))................((((...........))))...)))
Thermodynamic Ensemble Prediction
(....|(((.{.....|{{{....,||({,.....,,...((((...)))),}}},....,,,{{((({(((..(((((...)))))..))|{,{|||........})))....{(.{...,,,||}...{{{{.(((((...............))))),,...,)),...((.(((((....))))).)),}))))).....))}}................{(((...........)))}..,)))
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