Sequence Details

BLAST PRIMER
Symbol
hsa_CD44_0010800
Sequence Length
237 nt
GC Content
0.4895
AUAUGGACUCCAGUCAUAGUAUAACGCUUCAGCCUACUGCAAAUCCAAACACAGGUUUGGUGGAAGAUUUGGACAGGACAGGACCUCUUUCAAUGACAACGCGAGACCAAGACACAUUCCACCCCAGUGGGGGGUCCCAUACCACUCAUGGAUCUGAAUCAGAUGGACACUCACAUGGGAGUCAAGAAGGUGGAGCAAACACAACCUCUGGUCCUAUAAGGACACCCCAAAUUCCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-52.00 kcal/mol
Ensemble Metrics
Free Energy: -56.11
Frequency: 0.0013
Diversity: 67.32
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((.(((..((((.....((.....((((((.(((.((...............(((((.(((......(((((.(((......)))..)))))......))).)))))............(((((((((((..((((....(((....)))(((((...))))))))).))))).)))).))..)).)))))))))....)).....))))))))))..(((..........)))..
Thermodynamic Ensemble Prediction
{{{,(((..{(((.....{{.....((((({,(((.((......,,,......{||||,(((,,,...(((({.{((......))),,))))}......})}.))}))..,......,||{{((({{{{{(,,((((....{{,....)))(((((...)))))}))}.}}}}}.)))).}},.}).)))))))))....,}.....)))|||||}}..|||..........))),.
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