Sequence Details

BLAST PRIMER
Symbol
hsa_CD44_0011200
Sequence Length
214 nt
GC Content
0.5000
GAGACCAAGACACAUUCCACCCCAGUGGGGGGUCCCAUACCACUCAUGGAUCUGAAUCAGAUGGACACUCACAUGGGAGUCAAGAAGGUGGAGCAAACACAACCUCUGGUCCUAUAAGGACACCCCAAAUUCCAGAAUGGCUGAUCAUCUUGGCAUCCCUCUUGGCCUUGGCUUUGAUUCUUGCAGUUUGCAUUGCAGUCAACAGUCGAAGAAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-55.80 kcal/mol
Ensemble Metrics
Free Energy: -60.49
Frequency: 0.0005
Diversity: 75.24
Structure Visualization
Structure Prediction
MFE Structure Prediction
((..((((((......((((....))))(((((.((((.......))))(((((...))))).(((.(((....))).))).(((.(((............)))))).(((((...))))))))))......(((.....)))....))))))..))(.(((.....(((((((((((...((((((....))))))))))).))))))))).)
Thermodynamic Ensemble Prediction
((..((((((....,,(,{({{{.||||({{(({(,,,.{{,...,)))(((((...)))))}|||.|||...,|||{|||,(({,(((,,.,......}.,}}||||(((({...})))).,,,,.....,||}}.,}},},....)))))),.))(.(((|,|..{((((((((((,..((((({....))))))))))).))))))))).)
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