Sequence Details

BLAST PRIMER
Symbol
hsa_CD44_0011700
Sequence Length
285 nt
GC Content
0.4982
GUAAGGGGCUGUCCUGGGGGCUUUCAACUUGGAAAGGGCAUCAUUUAAACCUGGGCUUUAUAUCCUUGCUGCUCAGAGCGUAGUCCCUGGAACCAGCAGCCUGGGUACCCUGGGAGUUUGUUGGAAAUGCACAAUCUCAGACCCAACCCCAGACCUCCUAUGGCAGAGUCUGCAUCUUAACAAGUUUCCAGGGAUUCAUGUGCAUGGUGCAGCUUAAGACAUCUUUCUCUGCCCCGGUUUUUAGAGACAGGAGACACCUGUGAUUGUUUGGCUCAUCACUUUUAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-77.60 kcal/mol
Ensemble Metrics
Free Energy: -83.75
Frequency: 0.0000
Diversity: 87.46
Structure Visualization
Structure Prediction
MFE Structure Prediction
((......(((((((((((((.........(((.(((((.(((........))))))))...)))..((((((((..(((((((((((((((.(.......(((((...((((((...(((.......)))...)))))))))))....(((((((((...)).)).)))))...........).))))))))))).))))...))).)))))...(((........))))))))......))).))))).....))(((((((.((...))..)))))....))
Thermodynamic Ensemble Prediction
((..,{{{(({((((,{{{|{{{{,..,,,,||}}||||.,{....{((((.((((...........((((((((..(((((((((((((((,,.,,.,,,(((({...((((({..,{(({{,...,|}}...}})))}}}))),,,.|||{{{{||,..)),}}.)})))...........}.))))))))))).))))...))).)))))...(({........},,)))).))))}.,}},,|{{{{.....)))}|,,,.,...,))}),,,))|...})
Back