Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CDC14A_0000600

Sequence Length

323 nt

GC Content

0.3622

AUCGGUUAUAUUUUGCUACUUUAAGGAAUAGACCAAAAAGCACAGUAAAUACCCACUAUUUCUCCAUCGAUGAGGAGCUGGUCUAUGAAAAUUUCUAUGCAGAUUUUGGACCGCUGAACUUGGCAAUGGUGUACAGAUAUUGCUGCAAACUAAACAAGAAACUAAAAUCAUACAGUUUGUCAAGAAAGAAAAUAGUGCACUACACCUGUUUUGACCAACGGAAAAGAGCAAAUGCAGCAUUUUUGAUAGGUGCCUAUGCAGGAUUACAACAUGGAUUUUUUGACUUUGAGACAUUUGAUGUGGAUGAAUAUGAACAUUAUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-52.30 kcal/mol

Ensemble Metrics

Free Energy: -59.51

Frequency: 0.0000

Diversity: 122.28

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.(.((((((((..((((.((((((......)).....((((((((......(((((((.((((........))))..((((((...((((((......))))))))))))(((......))))))))))......))))).)))............(((((..........)))))(((((((((.......(((.....)))(((((......)))))......((....)).((((((.....))))))(((((..(.....)..))))).)))))))))..........)))).))))..)))))))).)))(....)

Thermodynamic Ensemble Prediction

{{.(.((((((((..((((.(((((,..,,{,,|{,{{{(,.{(({,......((((((({((({.,,...|,}}||{,({{{({..{{{{{((,,..,.}}}}}|}})))}|{{.....,||||,|||||,.,||,,,,}}})}|,.,,,......|{,,......,,...,)))))||||{||.|},,}||}|||.....,,{(((({...,,,.,,,|{{{{,.((....}}.|},}}))),,,})))}}{,,||}}}}....,..)})),.))))))).,,,,,.....})))).))))..)))))))}.)}}{....}