Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CDK13_0000400

Sequence Length

250 nt

GC Content

0.4040

GGAUAGUGUCUAGGUCACUUGCCCACCCUGGAGUGCAGUGAUGAUGUGAUCAUGGCUCACAGCAGCUUCGAACUCCUGGGCCCAGAGGAUCCUCCUGCUUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAUUUACCGCUGCCCCCUGAGCUACCAGGAGGAGAUGAUCUUUCAAAGAGUCCAGAGGAAAAGAAAACAGCAACACAGUUACAUAGUAAAAGGAGGCCUAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-44.50 kcal/mol

Ensemble Metrics

Free Energy: -48.14

Frequency: 0.0027

Diversity: 60.44

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.....(((((((....(((......(((..(((.(((.(((((...))))).))))))..)))...)))...)))))))))..(((..((((((.............................................................((((.((.(((.(((....((((((.....))))))....))).))).)).........)))).......((((...)))).)))))))))..

Thermodynamic Ensemble Prediction

((..{(((.|...|.)))}.{{{{{..,,((((({,,((,{({{((,,{.}}}.}.)))),,)),},.,..}}}))})))}}}..(((..((((((.............................................................((((.{({(((.(((....((((((.....))))))....))).))).)).........}}))......,|{{{...))},.)))))))))..