Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CDK13_0003800

Sequence Length

250 nt

GC Content

0.3920

ACGGUCUGGAAAAUCCCGAAGCAGAAGCCCGUAUUCAUCUAGGCAUUCAAGAUCUCGUAGCAGGCACAGAUUGUCUAGAUCCAGAAGUCGUCAUUCUAGUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUUUUUGAGAUAAGAGUCUUGGUCUGACACCCAGGCUGGAGUGCAGUUGUGCCAUUUCAGCUCACUGCAACCUCAGCCUCCUGAGCAGCUGGGAUUACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-50.80 kcal/mol

Ensemble Metrics

Free Energy: -54.24

Frequency: 0.0038

Diversity: 60.51

Structure Visualization

Structure Prediction

MFE Structure Prediction

(...)(((...((((((..(((((((...((..((((((((((((.((....(((......)))....)).)))))))))...)))..))...))))...........................................................(((((....)))))((((((.....))))))(.((((.(((((........))))))))).)...(((((....)))))..))))))))).)))

Thermodynamic Ensemble Prediction

({..|((({..,,{{{{{.,((,{{{...{{..{{{(((((((((.((....(((......}))....)).))))))))),,,))},,||,.,||||,{{........................................................(((((....)))))|({(((.....}||||((,{((({(({{(.{,.....}})),))))}),..{{|||,,..}})})..)))))))),.)})