Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CDK13_0011100

Sequence Length

190 nt

GC Content

0.3053

AAAAAGAAGGGAAAAGGAAAGAACAAACUUAACUAACGUUUGUGUACAUCACUUUAUUAUACAUAGUUUCCUUUCACAAGAAUUAUUUUAAAAGAAAGUUGAGAUGGAUGAUCUGUAUCCUUGGCGAACUCUUCACUAAAAAACCUAUAUUUCAAGCAAAUCAGGAACUUGCACAACUAGAAUUAAUAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-17.40 kcal/mol

Ensemble Metrics

Free Energy: -21.21

Frequency: 0.0021

Diversity: 42.00

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((((((((((....((((((.........)))))).....)).)).............))))))))).......(((((.........(((((....(((((.....)))))((((.(((...))).))))................((((.........)))).)))))......))))).

Thermodynamic Ensemble Prediction

.....((((((((((({,....((((((,,.......)))))),,...}}.}},............})))))))).......{{{(({{,......{{(((,,,,(((((.....)))))((((.(({...})).))))...........,,,..((({.........)))).,,,,}......,,},,.