Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CDK13_0015100

Sequence Length

157 nt

GC Content

0.3376

GAAAUGAAGAAAUAUUUUGAAAUUAGCAAAAUAGCAACAGUAUUCAAGUAUCUGAAAUUUUAAUAUGACUGCAGUUGACCUCUGAUAACUGGGGUAAGCAAAACUAUGGAUAAAGUGGAACUACUGUGUGUAGAAGAAGAGGCCAUGAAUAGCUAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-18.00 kcal/mol

Ensemble Metrics

Free Energy: -20.94

Frequency: 0.0085

Diversity: 49.27

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((......))).....(((((......(((...(((((.((((.......)))).)))))...))).(((.(((((........))))).))).....(((((...........((((.....)))).........)))))....))))).

Thermodynamic Ensemble Prediction

.....,......{{||||,...,{,{|,,,,,,(((,{,((((({{,,(,{,{...,|||,,,},}.{,|}|,(((,,{{{{...,,,},)}))).,}}.....{,{||,},...,.,,.{|||},,.,))}}.......,,|},},....)))},.