Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CDYL_0005600

Sequence Length

250 nt

GC Content

0.3920

GUUGAAAGGAUUGUUGACAAAAGGAAAAAUAAAAAAGGGAAGACAGAGUAUUUGGUUCGGUGGAAAGGCUAUGACAGCGAGGACGACACUUGGGAGCCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUGUGCCCAGAAUGGUGCCUGCCGUGUAGUCGGUGCUCUGCAAGUACUUGUGGAUGGAGUGAUUCCAGUAGAAUGGGUGCGCAUGGAAGACAAGGGUUGUU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-36.80 kcal/mol

Ensemble Metrics

Free Energy: -41.48

Frequency: 0.0005

Diversity: 71.25

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((.((((.(((...........................(((((((((.....((((((...((((.......((((.......))))..)))).....................................................(((((......))))))))))).......)))))))))...((((((((...((((.....)))).....))))))))..........))).)))).))

Thermodynamic Ensemble Prediction

,{{,,,,.,,{{.|||,|,........................(((((((({,,.{{({,,{|,..(((({{.,{.{({{({,{..,,||{({{,||,.....................................................||,||}},..,}))}))))),)}}}}}))}))))))))||||{|(((((...{,{,({{..||||.....,)))),,)}}.,.....,))),}})),))