Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CDYL_0005700

Sequence Length

250 nt

GC Content

0.3920

GUUGAAAGGAUUGUUGACAAAAGGAAAAAUAAAAAAGGGAAGACAGAGUAUUUGGUUCGGUGGAAAGGCUAUGACAGCGAGGACGACACUUGGGAGCCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACUUUAAAUUCUGAUCCAGGAGAACCAGUAGCCCACAGGCAGUCCUUUGACCUCCUGACCUGCUAUGCAUCCUCUGCCCUGCAGCUUCUCACAUCCCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-34.40 kcal/mol

Ensemble Metrics

Free Energy: -38.30

Frequency: 0.0018

Diversity: 67.91

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.((..((((((((.....................((((....(((((....((((((..((((..((((.......((((.......))))..)))).......................................................(((.....)))))))...))))))(((((...((((..(((....)))..))))....))))).....))))))))))))).))))..)).)(...)

Thermodynamic Ensemble Prediction

(,({,,(((((((({,......,............,(((....{,{{{,..,((((((..((({..((((.....,,|(((.......))}}..}))).......................................................,......,|},})))...))))))||,{|},.,{||},|||}}},))),,}}}|,.{{||,,,{{,..,}}))),,,)))),}},}..,,.},..,)