Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CDYL_0008000

Sequence Length

211 nt

GC Content

0.3791

CAAAGUUUGGUAGCUGUUUCCCAUGCUUGGCAUUACCUCUAAAGGUGAAGUAACAUAAGAAUUGUAUAGGAAUACCAUGAGAGCAUAACGUGAGCAUUAUCAGCUAGGAGUCCAAAUCCCCUUAAGGAUUAAUGCUCUCAGAGGAGCUCAGCACAACUCAAAAUGAAGAUUAAAAUUGACACAGGAUUCUUCUACACAUAGUAAUCUAUAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-34.10 kcal/mol

Ensemble Metrics

Free Energy: -39.20

Frequency: 0.0003

Diversity: 66.81

Structure Visualization

Structure Prediction

MFE Structure Prediction

.......(((((.....((((.((((...((.((((((....)))))).))............)))).)))))))))...(((.......(((((....((..((.(((((...(((((......)))))...))))).))..)))))))......))).....(((((..................))))).....((((....))))..

Thermodynamic Ensemble Prediction

...{((,{(({,({{{.{{{{||,{|,|,((.((((((....)))))).)).,,,.......||||,.{{,,,.||.(((((((((....,,(((....,,.}}}.{{.,,,,.{((((......))))).))))))))),.})}),,}}}},,,})},.....{.((({{,....{{.....|||.,}}))}...,|,,{}}}})),,..