Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CDYL_0008100

Sequence Length

447 nt

GC Content

0.4251

GUUUUCUCCUCGGCCCAGGCCCUUGUGUAGCAAAAAAGUGGAAUAUGAACUGAAAUCUGGGGUCUCCCUUUGACAGGAAAUUGCCAUCUUGCCAAUGUUUUUCAGAUACACACUUGACCCAAACGGUGCCUUUUCCGGCUUCAUUGGAGCUUGUGAACUUGUUUGCAGGUAUAUACCCAAAGAAUUGAAAGCCGGGUGGUGAAGAAAUCUUUGUACCCCUAUGUUAACAUCAUCAAUAGCUAAAAGGUGGAAGCAACCCAAGUGUCUAUCAUCAGCUGAAUAAAUAGACAAAAUGUGGCCUAUCCGCAGAAUGGAAUAUGAAUCAGCCUUAAAAAGCAUGGAGAUUCUCACACAUGCUGCAAUAUGGAUGAACCUUGCGGACAUGGUGCUCGGUGACAUAAGGCCAUCUAAAAAGGAUAAAUAACUAAACAGUUCCACUUACAAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-107.00 kcal/mol

Ensemble Metrics

Free Energy: -113.71

Frequency: 0.0000

Diversity: 102.08

Structure Visualization

Structure Prediction

MFE Structure Prediction

(......)((((((....))).((((...))))..(((((((((..............(((((((((...((.(((((........))))).))((((((((..((((.(((((((..((((..((.(((......))).)).))))((((..(((...((((.(((((((......((((((.((....(((....)))....)).))))))))))....))).))))...)))..))))....(((.......)))))))))).))))....(((((....(((..((...(((((.....)))))...))...)))...)))))....)))))))))))))))))(((.((((((((((...((.....)))))))).)))))))...(((........)))((((.....)))).............)))))))))....)))

Thermodynamic Ensemble Prediction

(......)((((((....))).((((...}}}}..(((((((((.,,..,,,......(((((((((...((.(((((........))))).))|(((((({..((((.(((((((,,(.....||}(({...,{{|{((({{{({{,((({{(((,..(({|.||||||,,....}|||,,,..|,..,|||}}|.|}},,,{...,))))}}))),...|||,},||...,,,..}}},...,)}}},.,}},.,,))))))).))))....(((((....(((..((...(((((.....)))))...))...)))...)))))....}}))))}}))))))))}(((.((((((((((...((.....)))))))).))))))).,,{||........))}((((.....))))...........,,)))))))))....)))