Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CDYL_0009900

Sequence Length

257 nt

GC Content

0.4475

GUACAUCUCCGUUCAUGGAUGCAUUAACAGCCAAUGGGACAACCAACAUACAGACAUCUGUUACAGGAGUGACUGCCAGCAAAAGGAAAUUUAUUGACGACAGAAGAGACCAGCCUUUUGACAAGCGAUUGCGUUUCAGCGUGAGGCAAACAGAAAGUGCCUACAGAUACAGAGAUAUUGUGGUCAGGAAGCAGGAUGGCUUCACCCACAUCUUGUUAUCCACAAAGUCCUCAGAGAAUAACUCACUAAAUCCAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-49.90 kcal/mol

Ensemble Metrics

Free Energy: -56.16

Frequency: 0.0000

Diversity: 76.04

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.......)(..((.(((((((.......))...(((.....)))....((((....)))).....(((.((((((..((((((((...(((.(((....))).)))......))))))).)..))....((......))((.(((((.........))))))).((((..((((...(((((....(((((......)))))..)))))))))..)))).....))))))).(((.....))).....))))))))

Thermodynamic Ensemble Prediction

(,,,..{{{{,{,,.((({((,.....,.,},..{((.....))}....{(((....))))..,.,|{|,|{|{((..{(((((((...{{{.((,....,,}.}}}......))))))).}..}},..,{({{....})|||{((({........,))))).}.{{{,..(((({.{(((((....,,(((((((((,.......,.))))))))).}))}}}}.)))))).(((.....))).....}}},,}))