Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CELF2_0017200

Sequence Length

358 nt

GC Content

0.6117

GGCUGCUCUUCACCUAUCGUGGUGAAGUUUGCUGACACUCAGAAGGACAAAGAGCAAAGGCGCCUCCAGCAGCAGCUCGCUCAGCAGAUGCAGCAGCUCAACACUGCCACCUGGGGGAACCUGACAGGGCUGGGCGGACUGACCCCACAGUAUCUGGCGCUCCUGCAGCAGGCCACCUCCUCCAGCAACCUGGGUGCGUUCAGCGGCAUUCAACAAAUGGCAGGCAUGAAUGCUUUACAGUUGCAGAACCUGGCGACGCUGGCUGCUGCUGCAGCUGCGGCCCAGACCUCAGCCACCAGCACCAAUGCAAACCCUCUCUCUACCACGAGCAGCGCCCUGGGAGCCCUCACGAGUCCCG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-127.30 kcal/mol

Ensemble Metrics

Free Energy: -133.64

Frequency: 0.0000

Diversity: 121.29

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((((((((......))))))((((.((((...))))..)))).....(((..((.((...((((((((((((((.(((....((((((((((((...((((((.((((((((.((((.((((((..(.(((((((......)))..)))).))).))))...)))).....)))))))).....(((((((........))))))).....))))))...)))..))).....))))))....))))))).....))))))))))..((((.((......)).)))).....)).))..)))..................)))))))...)(((((..(.....)..)))))

Thermodynamic Ensemble Prediction

((((((((((((((......))))))((((.((({...})))..}))}..{{|{,,.{((..({{{(((((((((((,(({({{,...||||||||||,,...||||,..|||||||,.|||,.,,(((((((,,(({(((,.....}}},.{|||{|{{.,|||{{{||||{{{..}}|}||||,,,.,(({{,(({{{{{{{.|||||,,...,}))}),,}}.)))}})),...,,))))),....})))})).).))))},)))))))}|,,|}|{.}}}}},}}))))}.,}}||.,,..,}}.....,,.,},,......))))))}.,}|{((((..{.....)..)))))