Sequence Details

BLAST PRIMER
Symbol
hsa_CHD2_0004800
Sequence Length
488 nt
GC Content
0.4734
AUAGGACUCUUGGUUUGGACAUACUACAUGGAUCAGUAAAUACCUGGGCACAGGACUUCAAAGCAAACACAGAUUCCCCCUCCCCCUUAAUAUUUAAGAAUUAAAAGAUGAUGAGAAAUAAGGACAAAAGCCAAGAGGAGGACAGUUCGCUACACAGCAAUGCAUCGAGUCACUCAGCCUCUGAAGAAGCUUCGGGUUCAGACUCAGGCAGUCAGUCGGAAAGUGAGCAGGGAAGUGAUCCAGGAAGUGGACAUGGCAGCGAGUCGAACAGCAGCUCUGAAUCUUCUGAGAGUCAGUCGGAAUCUGAGAGCGAAUCAGCAGGUUCCAAAUCCCAGCCAGUCCUCCCAGAAGCCAAAGAGAAGCCAGCCUCUAAGAAGGAACGGAUAGCUGAUGUGAAGAAGAUGUGGGAAGAAUAUCCUGAUGUUUAUGGGGUCAGGCGGUCAAACCGAAGCAGACAAGAACCAUCGCGAUUUAAUAUUAAGGAAGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-113.90 kcal/mol
Ensemble Metrics
Free Energy: -121.86
Frequency: 0.0000
Diversity: 153.94
Structure Visualization
Structure Prediction
MFE Structure Prediction
...(((.(((..(((((.......(((........)))....((((....)))).........)))))..))).)))..(((..((((((((((...(((((....((((...........((((.....((....))......))))(((....)))...(((((...(((((((((..((((((...))))))((((.(((((..((.(((((((.(........(..(((.....)))..)...).))).)))).))))))))))).((..((((....((((((.(((......((((((((.((.....))..))))))))...............))).))))))....))))..))...(((......)))........))))).))))....)))))...........((((((.((...)).))))))((((...))))..............))))..)))))))))))))))..)))
Thermodynamic Ensemble Prediction
...(((.(((,{(((((....,..{,,.,,....,}}}....((((....)))).........)))))..))).)))..(((..((((((((((...(((((....((((.,.........((.{....,||..,,{{,,{{..||||(((....,}}..||{,,||||{{,{||{{|||||{,,,..{||||||((((.{{(({..((.{{{{||{.{....||,||.,{({..{{.|||,.....),))),)|||.||}}}}}}}}}.||.,||((,,.{(({{{,,||{||||,.((((((((.((.....))..))))))))...,,,,.,|,.}|||||,,|||.|{...||||......,||}}}..,.,)),..}},..))))}|,|,|.|||}}),}|||,......,|||{{{.||....).)))))){{{|,..,))),,,}..........))))..)))))))))))))))..)))
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