Sequence Details

BLAST PRIMER
Symbol
hsa_CHD2_0012600
Sequence Length
360 nt
GC Content
0.4056
UUACAAAGAAGAUGAUGACUUUGAGACUGACUCAGAUGAUCUCAUUGAAAUGACUGGAGAAGGAGUUGAUGAACAGCAAGAUAAUAGUGAAACUAUUGAAAAGGUCUUAGAUUCAAGACUGGGAAAGAAAGGAGCCACUGGAGCAUCUACUACUGUAUAUGCGAUUGAAGCUAAUGGCGACCCUAGUGGUGACUUUGACACUGAAAAGGAUGAAGGUGAAAUCCAGUACCUCAUCAAGUGGAAGGGUUGGUCUUACAUCCACAGCACAUGGGAGAGUGAAGAAUCCUUACAGCAACAGAAAGUGAAGGGCCUAAAAAAACUAGAGAACUUCAAGAAAAAAGAGGACGAAAUCAAACAAUG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-70.50 kcal/mol
Ensemble Metrics
Free Energy: -78.15
Frequency: 0.0000
Diversity: 61.86
Structure Visualization
Structure Prediction
MFE Structure Prediction
.............(((.(.((((((.....))))))).)))(((((..(((..((.....))..)))))))).........(((((((...)))))))....((((((......)))))).......((((..((((((((.((((.(((....))).)))).......(((...)))....))))))))..))))....((....))(((((.((((........)))))))))...((..((((((....((((.(((.((.....)))))..))))..))))))..))...........(((((..((((.......))).)..)))))........((........))........
Thermodynamic Ensemble Prediction
({.,......{{{{({,{,((((((.....))))))}.}))|||||...,|,.((.....}}..||||,,,,.},,}....{((((((...))))))}....{(((((......)))))),,.....((((..((((((((.((((.(((....))).))))....,..(((...)))..,.))))))))..))))....|{....,,((((,,((((........)))))))))..{({.{((((({..{{((((.(((.((.....)))))..)))).,))))))}.),,}.........(((((..((((.......))).)..)))))........{{........}).......}
Back