Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CHD2_0017400

Sequence Length

195 nt

GC Content

0.4308

AGAAAAGUUUGAAUUUUGGGAAGAUUUUGAAGAAGACCAUGGGAAGGGGAGAGAAAAUGGCUACCAGAGUCUUCAUAAGGUGCUAGAGCCUUUCCUUCUCCGGAGAGUCAAAAAAGAUGUGGAGAAAUCCCUUCCUGCUAAAGUGGAACAGAUUCUCAGGGUGGAGAUGUCAGCCCUUCAGAAACAGUAUUACAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-40.60 kcal/mol

Ensemble Metrics

Free Energy: -45.19

Frequency: 0.0006

Diversity: 60.30

Structure Visualization

Structure Prediction

MFE Structure Prediction

(......)((((((.(((......((((((....((((.(.(((.((((((((....((((.(((.............)))))))....)))))))).))).).).)))............(((((.((..((((.........))))..)))))))(((((.((....)).))))))))))).))).))).)))

Thermodynamic Ensemble Prediction

(......)((((((.(((......{((({{,...{{({.({((({(((((({(....((((.(((..,..........)))))))...,))))))))||)},}.}.|||...........,(({|{,{|,,{(((.,,....}})))}..))))))){((((.((....)).)))))}}))),.)}}.})).)))