Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CHD2_0024400

Sequence Length

168 nt

GC Content

0.5000

CUGUGAAGACAAGUAAAUCUACAUUGGGUCAAACAGAUUUUCCAGAUUCUGCCGGUGGAGACAGAUAAAAAGCCUCAGGGGAAGCAGCUACAGACCCGAGCGGAUUACUUGUUGAAGCUGCUCAGAAAGGGUCUGGAGAAGAAGGGGGCUGUGACAGGUGGGGAAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-38.30 kcal/mol

Ensemble Metrics

Free Energy: -42.33

Frequency: 0.0015

Diversity: 34.49

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.....((((((....))).)))......)))).((((((.....(((((.((..............((((((........(..((.(((((((((((((....(((....))))))))).....))))))).))..)...))))))...)).))))))))))).

Thermodynamic Ensemble Prediction

((((...{{({{(({....}}}.}},.})}..)))).((((((....{((({(.{{.....},.......((((((........{..({.(((((((((((((.,{.{,....,)},)))))).....))))))).,}......)))))).,..),))}}})))))).