Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CHD2_0026400

Sequence Length

255 nt

GC Content

0.4078

GGAGAAGAUAUACUGAUAAAGAGGAUUGGACACAUAUGUGCUGAGAAAAUAUUACAAAAUGAAAUGAUGAUUGCCAUUUUGAAGUGAAAGAAGGCCCUGAAGCAGAGACCACGAUUUGUAGCUUUAAAGAAACAACCUGCAUAUUUAGGAGGGGAGAAUCUGGAACUUCGAGAUUAUCAGCUAGAAGGUCUAAACUGGCUAGCUCAUUCCUGGUGCAAGAAUACGAAGAGCAGCUGAAAGAAAAUGCCAGCGAGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-42.40 kcal/mol

Ensemble Metrics

Free Energy: -47.81

Frequency: 0.0002

Diversity: 71.10

Structure Visualization

Structure Prediction

MFE Structure Prediction

((........((((...........((((.(((....)))))))..........(((((((.(((....)))..))))))).))))........))((...((..(((((.....((.(((((............(((.(.......).))).((.(((((.((...)).))))).))))))).)))))))....((((....((.(((..(.(((.............))).).))).))....))))))..))

Thermodynamic Ensemble Prediction

(,........,,((...........{(((.(((....)))))}}.....,,{{.(((((((.(((....)))..))))))).}}}}........)|((,,,((({({,......}))}}.|||||..........{{({({,...{{||||},((.{((((.({...)).))))}.)){(((((..(((....)))..))))))}.})|}|}||||}.........,},}}.{|{{........,.,)))).}))