Sequence Details

BLAST PRIMER
Symbol
hsa_CHD2_0028100
Sequence Length
498 nt
GC Content
0.4378
AAAUAAUAGUGUAAUCCUUGCUGAUGAAAUGGGCCUAGGAAAGACCAUCCAGACCAUAUCAUUCCUCUCCUACCUGUUCCACCAACACCAGCUGUAUGGCCCCUUUCUUAUAGUCGUCCCUUUAUCCACCCUCACCUCAUGGCAGAGAGAGUUUGAAAUCUGGGCACCAGAGAUUAACGUAGUGGUUUACAUAGGUGACCUGAUGAGCAGAAAUACGAUACGGGAAUAUGAAUGGAUUCAUUCCCAAACCAAAAGAUUGAAGUUCAACGCACUUAUAACAACAUAUGAGAUCCUCUUGAAAGAUAAGACUGUGCUGGGCAGUAUUAACUGGGCCUUUCUGGGAGUGGAUGAAGCCCAUCGGUUGAAGAAUGAUGACUCUUUAUUGUAUAAAACUCUGAUUGAUUUCAAGUCCAACCAUAGGCUCCUGAUUACGGGGACCCCUCUUCAGAAUUCCCUCAAAGAGCUCUGGUCCUUGCUGCACUUUAUUAUGCCGGAGAA

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-102.80 kcal/mol
Ensemble Metrics
Free Energy: -114.72
Frequency: 0.0000
Diversity: 176.04
Structure Visualization
Structure Prediction
MFE Structure Prediction
..........((((...)))).(((((.((((..((.(((.......))))).)))).)))))..(((((....((((.....))))(((((.((((.(....(((((....(((((((((....((((.(((..(((......))).))).((((..(((((...)))))..))))....)))).......))).)))..)))....)))))..).))))((((..(((((....)))))))))...........((((...))))....((((((......))))))....(((((.....)))))....)))))((((((...(((((((((((..((((((...(((((......(((((....(((((((....))))))).....(((.(((......)))))).)))))...((.(((((....))))).))...)))))..))))))..)))).)).)))))...)))))).............))))).
Thermodynamic Ensemble Prediction
..{{,,.{{{(({.....,||,{((((.{{((,,((,(((.......}}}}}.}}}}.|}|}|,.{({((....{(((.....},},(((({.{{{,,(,,,.{{{({{{{,({{((((((..,.((((.(((.{(,,..}}..))).},|,{{((..(((((...)))))..)))),...)})).......))).))).,}})}}},)),....,.,,,,(((({.,((({....}))))))))....,,.....|||...{|||,.,..((((((......))))))....||||}...,.}}}}|,|||),}))||{||{...,|||||||{{{,,|||{||}},|||{({{.{{.(((((,,,{{{{{,,,.,,,}}}},,,.....{{{.{((......)))})),))))),}.)))}|{,,....{((({{{{.{{{{|,|{.,,,,,),.,)))}),.,.)))}}})),)))}},.,}}}.,...}}}},.
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