Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CHD2_0035500

Sequence Length

214 nt

GC Content

0.5234

GCUCAGACAAAUGACAGUGACUCUGACACUGAGUCUAAGAGGCAGGCCCAGAGAUCCUCUGCUUCUGAGAGUGAAACGGAAGACUCUGAUGAUGACAAGAAGCCAAAGCGCAGAGGGCGUCCGAGGAGUGUGCGGAAGGACCUCGUGGAGGGAUUUACUGAUGCAGAGAUCCGAAGGUUGGUGGAGGCUCUGUUCUCACUGAGCUUGUUUGAAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-63.20 kcal/mol

Ensemble Metrics

Free Energy: -66.21

Frequency: 0.0076

Diversity: 45.16

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((........((((((.(((..(((.((((((.....(((.((((.((..((((((((.(((.(((((..........))))).).)).........((....))))))))))..))...)).)).)))....))).))))))...))).))))))..((((((.((((........))))..)))))).....))))))((......))

Thermodynamic Ensemble Prediction

((((((........((((((,(((..(((.((((((.....(((.((((.((..((((((((,(((.(((((..........))))).}.}}.........((....))))))))))..))...)).)).)))....)))}})))))..})),.))))))..((((((.((((........))))..))))))..,,.))))))((......))