Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CHD2_0043900

Sequence Length

256 nt

GC Content

0.5039

GUUCAUCAAGGCUUAUAAGAAGUUUGGUCUCCCUCUUGAACGGAGCAAAAGAAGAAAGACGACGUGACUGGGGGUAAGAAACCAUUUCGUCCAGAGGCCUCAGGCUCCAGCCGGGACUCUCUGAUAUCUCAGUCCCAUACCUCACACAACCUUCACCCUCAGAAGCCUCAUUUGCCUGCCUCCCAUGGCCCACAGAUGCAUGGACACCCAAGAGAUAACUACAAUCACCCCAACAAGAGACACUUCAGUAAUGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-48.00 kcal/mol

Ensemble Metrics

Free Energy: -54.14

Frequency: 0.0000

Diversity: 74.93

Structure Visualization

Structure Prediction

MFE Structure Prediction

..........((((((..(((((...(((((.((((((.(((..((...........).)..)))..(((((((((((..((......))...((((.....(((....)))((((((............))))))...)))).......))).))))))))...((.((((((...(((......)))...))))))...)).....))))))......................)))))))))).)))).))..

Thermodynamic Ensemble Prediction

((......((((((....{{{{{,,.((((,.(((((...........}}},,}..})}),,,{,..((((((((,,(,.,,...,,},,...((((,....(((....)))(((({{...,{,....}}))))))...,,}}.......}}},}}}))))))))))),,,,,|}{{(({..{{{{|}|...,,,,,}}}})).....,,.,,|,,.......,,,..........||},,,}}}}.,,...))))