Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CHD2_0044000

Sequence Length

289 nt

GC Content

0.5121

GUUCAUCAAGGCUUAUAAGAAGUUUGGUCUCCCUCUUGAACGAUCGAGGAGACUGGCAGAGGGAAAGAAAGUUCAACUAUGGUGGUGGCAACAACAAUCCACCAUGGGGAAGCGACAGGCACCAUCAGUAUGAGCAGCACUGGUACAAGGACCACCAUUAUGGGGACCGGCGACAUAUGGAUGCCCACCGUUCCGGAAGCUAUCGACCCAACAACAUGUCCAGAAAGAGGCCUUAUGACCAGUACAGCAGUGACCGAGACCACCGGGGACACAGAGAUUAUUAUGACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-67.60 kcal/mol

Ensemble Metrics

Free Energy: -75.35

Frequency: 0.0000

Diversity: 58.17

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.(((.(((((((....(((.(((....(((((((.(..((.((.....)).)).))))))))...))).)))..(((((((((((.......))..)))))))))((..((.....)).))....((((.((.....)).))))..((((........((((..((((.(((...(((....)))..)))))))..........)))).......))))......))))))))))))(.((.((...((..(((.......)))..)).............)))).)

Thermodynamic Ensemble Prediction

({{(((.(((((((....,..{((,(((((((((({,{..,,.||,,},,))})},}}}}|||,..{{.{{{{|..((((((((({(.......},..)))))))))(({{{((...((((((((..((((.((.....)).))))..((.((.(({...})))).)).....,..)))).))))...)))))).},,}}}.}),,))}.,,....,}},.......))))))))))))(.((.((...(((.(({.,.....}}),..),}.....,,.,,.)))).)