Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CHD2_0048300

Sequence Length

234 nt

GC Content

0.3889

GAAAACAAAGUGCCCAGGCUGAAAGAGGAGCAUGGAAUUGAGCUUUCAUCUCCUAGGCAUUCAGAUAAUCCAUCAGAAGAGGGAGAAGUGAAAGAUGAUGGCUUGGAAAAAAGUCCAAUGAAAAAAAAACAGAAGAAGAAAGAGAACAAGGAGAACAAGGAGAAACAAAUGAGUUCUAGGAAAGACAAAGAAGGGGACAAGGAAAGAAAGAAGUCAAAAGAUAAGAAAGAGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-27.00 kcal/mol

Ensemble Metrics

Free Energy: -30.87

Frequency: 0.0019

Diversity: 53.91

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(...((.(((...(((((..(((((.((((((......))))))))))).....))))).....((((((....................)))))).(((((......))))).................................(((((................)))))...............))).))..............(((....)))...........)

Thermodynamic Ensemble Prediction

.....{...((.(((..,(({,,..{{{||,{{{{{{......})))}||||}}...,.||||}....,(({((,...,,.}}}....},,....)))}})|{((({......)))),.................................{{{{{................)))))........,......})).))..............{{{....,,,...........,