Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CHD2_0052900

Sequence Length

165 nt

GC Content

0.4970

GUGGGGGUCCUGGUGCAGGCAGUGAACAGGCUUCUAAUGUGGGGUUCAGUAGUGCCAGCAAGUGGGGGAAACUUUCAGUAUUGCGCUAGGUCAACACUUCCUGCUGCAUUUCCUUCCCUUUGCACAGCUUGAAGAAAUAGAGUAGACAGAAUCACACAUCAUGUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-39.20 kcal/mol

Ensemble Metrics

Free Energy: -43.04

Frequency: 0.0020

Diversity: 37.10

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((..((.(((((((((((((.((....((((((......))))))...)).))))....(.((((((...)))))).)..)))))))))))..)))...(((((..(((((.(((.....((...))..))))))))..))))).......((((.....))))

Thermodynamic Ensemble Prediction

(((..((.((((((((((..{.((({.,{.((((({.{,{,,(({........))).,}}..}}})))...}})))).}.))))))))))))..)))...(((((..((((,,(((.,...,,..,),..))))))))..)))))..,,...{{((,....))))