Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CHD7_0005600

Sequence Length

162 nt

GC Content

0.4259

CGAUCCACUUUGAAUUCUAGUAAUAAGAAACCUGACUCAGAAGCAAGUGCUUUGAAGAAAAAGGUCAACAAGGGAAAAACAGAAGGUUCUGAAAAUUCAGACUUAGACAAAACACCCCCACCAUCUCCUCCUCCUGAAGAAGAUGAGGACCCAGGUGUUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-25.70 kcal/mol

Ensemble Metrics

Free Energy: -28.84

Frequency: 0.0061

Diversity: 27.01

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(.....).(((((((((.......))))((((..((..(((((....)))))..))....))))......(((.........((((.((((....))))))))..........))).((((...(((((.((........)).)))))....)))))))))

Thermodynamic Ensemble Prediction

.{.....}.((((,((((.......)))}((((..((..(((((....)))))..))....))))......(((.........(((,{((((....))))))))..........})).((((...(((((.((........)).)))))....))))})))}