Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CHD7_0008200

Sequence Length

187 nt

GC Content

0.3957

GUGGUAGCAAAGGGGAAUGAUUUCUUGCUCUUAUAGCUUAGGAUGAGAUGUUUUCUAUUUGGAUUGAUGCACAUGCCUUUUUUUUUAGGAAUCUGUUGAUGCAGAAGGCCCAGUGGUAGAAAAAAUUAUGAGCAGUCGUUCAGUAAAAAAGCAGGUGAGUGCCAUUGGAGCCAUUAAAAUCUGUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-38.00 kcal/mol

Ensemble Metrics

Free Energy: -41.20

Frequency: 0.0055

Diversity: 40.34

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.(...((((..((((.(((.(((((.(((((.....)))))))))).))))))).))))...).)).((((..(((........)))..(((((....))))).((((((((((((..........(((((....))))).................))))))))).))).........))))..

Thermodynamic Ensemble Prediction

{(,(,..((((.{((((.,{{,(({{{.(((((.....)))))})))).}}))))).))))...}.,}.((({..(((........)))..(((((....))))).((((((((((((..........(((((....))))).,...............))))))))).))).........))))..