Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CHD7_0008700

Sequence Length

233 nt

GC Content

0.4335

AAGGAAUCUGGAGAGGAGGUAGAAAUUGAGGAAUUCUAUGUGAAAUACAAAAACUUGGUCGAGUGAUAAAGGGGUCCUAUAAGUUUCAUGCCAUCAUCACUACAUUUGAGAUGAUUUUGACUGAUUGUCCUGAGCUGCGGAAUAUUCCAUGGCGCUGUGUAGUCAUUGAUGAAGCCCACAGGCUGAAGAACAGGAACUGCAAGCUGUUGGAGGGACUCAAGAUGAUGGACUUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-46.10 kcal/mol

Ensemble Metrics

Free Energy: -52.06

Frequency: 0.0001

Diversity: 78.60

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((......(((....(.((((((.((....)))))))).)............(((.(((....))).)))...)))......)))((.(((((((((...........(((((((......)))))))....((((.(((....))).))))(((.((((((..(((....((((....))))......)))..))))))))).....(((...)))..)))))))).).))

Thermodynamic Ensemble Prediction

,(({,.{((,......{,(((((({((..,,|,}||}}|,|......|,....{{|.{{{...,})).,))}}.)))).,,|||}}|.,||{((((((.......,,{.{|||{{{..,,..}}}}})),,..((((.(((....))).))))(((.((((((,.(((.{..((((....))))......)))..)))))))))..,|,|,|,,.)))},)))))))),))))