Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CHD7_0011600

Sequence Length

177 nt

GC Content

0.4633

GGUCGAGUGAUAAAGGGGUCCUAUAAGUUUCAUGCCAUCAUCACUACAUUUGAGAUGAUUUUGACUGAUUGUCCUGAGCUGCGGAAUAUUCCAUGGCGCUGUGUAGUCAUUGAUGAAGCCCACAGGCUGAAGAACAGGAACUGCAAGCUGUUGGAGGGACUCAAGAUGAUGGACUUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-39.00 kcal/mol

Ensemble Metrics

Free Energy: -42.49

Frequency: 0.0035

Diversity: 47.33

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.((((((...((.((............)).))...))))))........(((((((......)))))))....((((.(((....))).))))(((.((((((..(((....((((....))))......)))..))))))))).........))))((((........))))

Thermodynamic Ensemble Prediction

((((.((((((...{(,((,...........},.)}.|,|}}}}}.,....,.(((((((......))))))),.,.((((.(((....))).))))(((.((((((..{((.{..((((....))))......)))..)))))))))....,....))))((((........))))