Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CHD7_0012600

Sequence Length

206 nt

GC Content

0.4806

AACAACCUGGUUAUUGAUACUCCAAGAGUGAGAAAGCAGACCAGGCUCUACAGUGCAGUGAAGGAAGAUGAGCUGAUGGAGUUCUCAGACUUGGAAAGUGAUUCUGAAGAAAAGCCCUGUGCAAAGCCACGGCGUCCCCAGGAUAAGUCACAGGGCUAUGCAAGGAGUGAAUGUUUCAGGGUGGAGAAGAAUCUGCUUGUCUAUGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-54.90 kcal/mol

Ensemble Metrics

Free Energy: -59.18

Frequency: 0.0010

Diversity: 37.95

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((((.((..(((((...)))))...))...)))))))((.(((......))).))..((((((((.(((....(((((...(((((((....(((((.......((((((((((....((..((....))..))....).)))))))))......))))).....)))))))...)))))..))).))))))))....

Thermodynamic Ensemble Prediction

.....(((((((.{(..{((((...})))),,......))))))){({({(,.....,)).}),.((((((((.(((....(((((...(((((({.,{.(((((...,...((((((((((....((..((....})..))....).)))))))))...,..)))))...,.)))))))...)))))..))).))))))))....