Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CHD7_0013400

Sequence Length

290 nt

GC Content

0.5621

GUUUGUCAGCUCCUGUGCCAAGGGGAAGGAAGGGAAAGAAGGUGAAAGCCCAGAGCACACAGCCGGUGGUGCAGGAUGCCGACUGGCUGGCCAGCUGCAACCCAGAUGCCCUGUUCCAGGAGGACAGCUACAAGAAACACCUGAAGCAUCACUGUAACAAGCUAUGAGAAGUACAACUCCAUGCGAGCUGACCCCGCGCUGUGCUUUCUGGAACGAGUCGGUAUGCCUGAUGCCAAGGCCAUAGCUGCCGAGCAAAGAGGAACAGACAUGCUAGCAGAUGGUGGUGACGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-84.40 kcal/mol

Ensemble Metrics

Free Energy: -91.19

Frequency: 0.0000

Diversity: 93.91

Structure Visualization

Structure Prediction

MFE Structure Prediction

(...((((((((((((.((....((((...((((......(((...(((...(.((...((((((((.(.(((...)))).))))))))))).)))...)))......)))).))))....)))))).........(((..(((....))).))).....((...(((........)))...)))))))))))(((((((..(((.((((...((.(((.((...(((..(((...(((.......)))..)))...))).)).))).))....)))).))))))).)))

Thermodynamic Ensemble Prediction

(({(,(((,(((((.{.({...,|,..,,..|||......|,|,,,||)|{.,.((.{,({((({{(,(,(((,,,||||,|||}}}}||,,,}}}{,.,}}|,,.,}}}}|((((((((((((((((.....,.......|{..{{.,,..}}}.....|{,{{(,(..,.....)))}}}||{.|,......}}}))))).)))))))))))}}}}}}||}|.}}}}.)))),.}||(({..((((..((((..............)))).))))}))))))),.,))