Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CNOT6L_0000400

Sequence Length

250 nt

GC Content

0.3560

GAAGUGGAAACAGAGCAAUACUUCACUCUCUUUCUGCCAGCAUUGAAGGAGCGUGGAUAUGAUGGAUUUUUUUCUCCAAAGUCACGUGCCAAAAUCAUGUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUAGGGCUAAAUAUAUGCUUGUUUCCUUGCACCUGUGUACUUCCCCUCUCUCCCUCCCUUUCCUUCCCCUGUAGGCAAUAAAUGGCCAUUUUGCAACUGCA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-37.10 kcal/mol

Ensemble Metrics

Free Energy: -41.14

Frequency: 0.0014

Diversity: 47.95

Structure Visualization

Structure Prediction

MFE Structure Prediction

(....(((((..(((......(((((.(((((((..........))))))).))))).....((((........)))).....(((((.......)))))...................................................((((....((((((((..(....)..)))..))))).....))))......)))..))))).....)(((((((((............))))..)))))

Thermodynamic Ensemble Prediction

(..{.(((((..(((..,...{((((.(((((((.,........))))))).))))},,|,,((((........))))..,},(((((.......)))))...................................................((((....{(((((({.,(,...,..)))..})))),....)))}......)))..)))))..}..)(((((((({..........,,))))..)))))