Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CNTRL_0014500

Sequence Length

250 nt

GC Content

0.3920

AUGCAGACAGUGGAGGAGAUAGUCAGGAAGAGAGUGAGCUGGAUGACCAAGAAGAACCCCCAUUUGUGCCUCCUCCUGGAUACAUGAUGUAUACUGUGCUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUGAAGAAAAACUGAACUUUUCCCAAGUUCACAUAAUGGAUGAACACUGGCGUGGAGAAGCACUCCGGGAGAAACUGCGUCACCGGGAAGACCGACUCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-41.80 kcal/mol

Ensemble Metrics

Free Energy: -45.67

Frequency: 0.0019

Diversity: 44.98

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((((((((((((...(.((.((((.(.((...((((....)).))....)).).).))).))))))))))...(((((...)))))))))).....................................................................(((((((..((((((......).)))))...((.(((......))).))))))))).))))))(..(((.....)))......)

Thermodynamic Ensemble Prediction

((((((((((((((((((...{,((,(({{.(.((...((((....)},.}....}}.,,}.))).)))))))))),,.(((({...})))))))))................................................................,,...(({{{{{..((((({......,.))))).,,((.(((......))).))))}}}},.))))))(..(((.....)))......)