Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CORO1C_0000600

Sequence Length

455 nt

GC Content

0.3978

CCAAGUUGGAUGAGAUUUUAAAAGAGAUCAAAUCUAUAAAAGACACAAUCUGCAAUCAAGAUGAGCGUAUUUCCAAGUUAGAACAGCAGAUGGCAAAGAUAGCAGCCUGAAGGUCCCACCCCCACCCCUACAGAAAAAAUGGGAGCAAGAACUUGUGCUUGGGAGCUGGUUAUUGGUGUGGUCCUAGGGAGGGCGGAAAGGGAGGCACUGCCAUUUGGAGACAUUCCAUUUCAGAUUUGUCAACCAGCGAUAGGCCACAUUCCAGUAAGAACUCAAUUUGUCUCCCAAAUUUGCAGAAACAAAACGUGAUUUAAAAGCUGAGCUUUUUAUCAGAAAGCUUUUUUGAUGUUUUAAGUGUUAUGUGACUUGUUGAACUUUUUAAAAAGUGCUACUUUUAAAAUCCCAGAUACUCUGAAUUUUAGAAAACAAACUAAUUCUGAUUGUGUCGUGCCCAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-96.40 kcal/mol

Ensemble Metrics

Free Energy: -105.36

Frequency: 0.0000

Diversity: 180.58

Structure Visualization

Structure Prediction

MFE Structure Prediction

(...)((((.((.(((((((((((((((...))))......((((.((((((......(((((.(.((.(((((((((........(((...((.......))...)))....((((.(((((.((((((((..((.(((.((..((((........))))....)).))).))..))))).....))).))).))...))))(((...)))))))))))).)).))))))))))))))))......(((((((.(((((..((.(.((((((((((((((.((.((....))..)).)))))................(((((((((...)))))))))..)))).))))).).))..))))).))))))).(((((....)))))....))))))))))).))(((((((.((((..(((........))))))).))..)))))....))))

Thermodynamic Ensemble Prediction

(...)((((.{,.((((((,,,,||||}}..,}},......(((({((((((,..,,.,{,{|,{.|{.,{{{{{{{(,....,.{{{{{{(((,......||.|{|{...{,((((.{{{((..(((,..........,}||{{((........}|}|||{|{,|||}||,|||||||||,||||}}}.}||,}|,..}|}|{||.,})))}}}|||}|}.,}}))}}}}},}}}}))))..,,..{{{||||,||||{.,||,|.{{{{{{{{,{{{{{,||.||..,,}},.}}.}}}},..,|,,...,{{{,,.{(((((((,...})))))))),,}))).))))).}.))..))))).))))))).{((({....}))))....}|||||||||,.|{((,,,||}|,||}}|||,,......}}}},},.))}})))))....))))