Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CORO1C_0004000

Sequence Length

302 nt

GC Content

0.4934

GCUGUGAUAAUGCCAUUAUCAUCUGGAAUGUGGGAACAGGGGAAGCCCUUAUAAACUUGGACGAUAUGCAUUCAGACAUGAUUUACAAUGUGAGCUGGAACCGGAAUGGCAGUCUGAUCUGCACAGCUUCCAAAGACAAGAAAGUGAGAGUCAUUGAUCCCAGGAAACAAGAGAUUGUUGCUGAGAAGGAGAAAGCACAUGAAGGAGCAAGACCCAUGAGAGCCAUCUUCCUGGCCGAUGGCAAUGUCUUCACCACUGGGUUCAGCCGCAUGAGCGAGCGGCAGCUGGCUCUCUGGAAUCCG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-82.60 kcal/mol

Ensemble Metrics

Free Energy: -88.34

Frequency: 0.0001

Diversity: 66.50

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((((((...))))))))(((((((((.(...((((...............))))..).))))...)))))((((........)))).)))((((.((((((((((((......)))).))..))))..............((((((((.(((.(((((.....((((.(((((((.((...((((((..((.((((..((.......))))))...))..)).))))...)).))))))).)))).....))))).)))(((((........)))))...)))))))).))..))))

Thermodynamic Ensemble Prediction

({{((((((((...))))))))|(((({(((,,...,((((....))))......,|||,,.....||||}||||(({(........}})).))}((({.{{({{,{{{(((,,,,,.}))),}}..})))....,,......}}((((((((.(((.(((((.....((((.(((((((,({...((((((..((.((((..((.......))))))...))..))}})))..,}}.})))))).)))).....))))).)))(((((........)))))...)))))))).}}..))))