Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DENND2A_0000400

Sequence Length

250 nt

GC Content

0.4720

GUGACCUGGAACUCCCCUCGGUACUGACAUGAUGACAGUGUGCAGGCCGGCCAAGGGCAGCCACAGCCAGACUGAAAACCUGAGCUACAAAUUGGCUGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUCCUCCAAGAGCCUCCGCCACUUCCUGGAGGUCUUCAUGGAGACUCAGAUGUUUCGGGGCUUCAUCCAGGAGCGGGAGCUGCGCCGGCAGGAUGCCAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-63.30 kcal/mol

Ensemble Metrics

Free Energy: -66.50

Frequency: 0.0056

Diversity: 50.78

Structure Visualization

Structure Prediction

MFE Structure Prediction

....((((((((((((((((((.(((((((.......)))).)))))))....))))((((((.((((((.........))).)))......))))))......................................................(((((.(((((((((........)))))))..)).))))).....)).))))))))(((((.....)))))((.(.((((....))))..).))....

Thermodynamic Ensemble Prediction

(({.(((((({{,(((((((((.(((((((.......)))).)))))))|...,}))((((((.((((((.........))).)))......))))))......................................................(((((.(((((((((........))))))},,)).))))).....}}.))})))))|,,||.}}},))|||{,..,||{|,}{{|||,..})))...)