Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DENND2A_0002500

Sequence Length

200 nt

GC Content

0.5200

AUCCGCCAAUGAAGGAGAACCCUUAUGAGGACAUCGAGUUACAUGGUCGCUGCCUGGGAAAGAAGUGUGUCUUGAAUUUUCCUGCUUCUCCCACCUCUUCCAUCCCUGACACACUCACCAAGCCUGGAGGCAAAGGGAAGCGCCUUCCUGAAGUUUACUGCAUUGUGAGCCGCCUGGGAUGCUUCAGCCUCUUUUCAAGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-43.30 kcal/mol

Ensemble Metrics

Free Energy: -47.75

Frequency: 0.0007

Diversity: 68.67

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((...(((((((..........((((..(((((.(((((..((.(.....).)).....))))).)))))....))))(((((((...(((((........(((.....)))........)))))....)))))))((.((((.(..((((((......))))))..)..)))).))......)))))))...))

Thermodynamic Ensemble Prediction

.....((..{(((((((...,{,....(((.((.(((.(.....).))).))}}|((({.,((((({.{...........,.,}})))}}}).,,,,,..{{{{{{.{.....{||{,.,.{{..|||||{...||(((({,.}||||},..|||{{|.,,...)))))}.....))))))},,,...))))))},,.))