Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DENND4C_0007100

Sequence Length

240 nt

GC Content

0.4000

UGGGGUUCCAGCGUGUUUCUGUGUUAUAAGAAGUCUGUACCUGCUUCAAAUGCAAUAGCAUAUAAGGGUUUAAUUUUUAGAUAUCCAGAAGAGGACUAUGAGUCAUUUCCACUCUCAGAAUCAGAUGUACCUCUUUUCUGCCUUCCUAUGGGAGCUACUAUUGAGUGCUGGGAUCCUGAAACCAAAUAUCCACUUCCAGUUUUUUCAACUUUUGUCUUGACAGGUUCUUCAGCCAAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-43.50 kcal/mol

Ensemble Metrics

Free Energy: -49.44

Frequency: 0.0001

Diversity: 62.33

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((((((((((((..((((((....(((((........))))).))))))..)))))....((((.............))))((((((((((..(((.((.............)).)))...)).))))))))..((.((((...)))))).(((....))))))))))))))(((((................)))))....)(((((...((((........))))...)))))

Thermodynamic Ensemble Prediction

(((((((((((((((((..((((({....(((((........))))).}}}))}..}))))....((((,{,,...,}}}}.}})){(((((((((..(((.{{.............}}.)))...)).)))))))),,{,(((((...))))),.,{,....}}}))))))))))}{{{{.................}}},,,,},)(((((,..{{{{..,,....}})).,.}})))