Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DENND4C_0023300

Sequence Length

288 nt

GC Content

0.4375

GAAGAAACUAAUAGAGACUACAGCUUCCCAGCUGGCCUAGAAGACCAUAUUUUGGGGGAGAAUAUAUCGCCUAACACAAGUAUCUCAGGGUUGGUCCCCAGUGAACUUACCCAGAGCAACACAAGUCUUGGCAGUAGCAGCAGUAGUGGAGAUGUAGGAAAACUGCAUUAUCCAACAGGUGAAGUUCCAUUUCCAAGAGGCAUGAAAGGGCAAGACUUUGAAAAAUCAGAUCAUGGUUCUUCUCAAAAUACCAGCAUGUCUAGCAUCUAUCAGAAUUGUGCAAUGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-61.30 kcal/mol

Ensemble Metrics

Free Energy: -68.86

Frequency: 0.0000

Diversity: 64.47

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((...(((.......(((((.(((.(...((((.((...(((((......(((((.((.......)).))))).....((..(((.((((.((((......).))).)))).)))..))....))))))))))).).))).)))))((((((((((.....))))))).)))....)))....)))(...((((..(((((((....((.........(((.(((((.....))))).)))........))..))))))).((((...........))))..)))))

Thermodynamic Ensemble Prediction

((((....,.........,,...))))(,,(((((...((((((((((..,(((((.((.......)).))))}.....((..(((.((((.((({......).})).)))).)))..))..{(((((((.(.....({((.....(((((((({{(,,...||}||||.,},....}})}.,}}}}}))))))}....)).))....).)))))))}{{{....}))}}..))))}}))))).......))))).,}{{{,((((,..........))))..}))))