Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DENND4C_0024000

Sequence Length

219 nt

GC Content

0.3927

AGGCAUUUGACAAUGAAUAUGGAAUUGCAUACAAUAGUCUGUCUUCAGAGAUUCUUGAAAGGUUGCAGAAAAUUGAUGCUCCACCAAGUGCCAGUGUCGAGUGGUGCAGGAAGUGUUUUGGAGCGCCUCUCAUUUAAAUAGAGAUUCACUAGAAUGUUGACACACAAGGCUUGGGGAUUAGAUUUCAUCUGGAAACAUUCAAGUUUUUUUUUCCAAAUC

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-47.40 kcal/mol

Ensemble Metrics

Free Energy: -51.87

Frequency: 0.0007

Diversity: 57.45

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((..(((........((((......)))))))..))))(.....(((((..((((((.(..(.(((((((((.....(((.((((((....((((((((.(((((...............))))).))).........((.((((....)))).))))))).....)))))))))...)))))..)))).)..).))))))..)))))........)

Thermodynamic Ensemble Prediction

((((..{{{...,|{..,.{(,,|..{|||.|||{.}|||(,,{{.{((({..{{|{{{.|.,{.||||,,|||,,||,(((.((((((....((((((((.(((((..{{,....}))...))))).))).........{(.((((....)))).))))))).....))))))))).,||||},..)))).||,|.}))))),,))}},,,,,,...)