Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DHX34_0002800

Sequence Length

175 nt

GC Content

0.6400

AUGAAGAGCAUGAGUGUGGGGGACCCCCGAACCUUCCCCUUCAUCGAGCCCCCACCACCAGCCAGCCUGGAAACCGCCAUCCUCUACCUCCGGGACCAGGGGGCCCUGGACAGCUCAGAGGCCCUCACACCCAUUGGGUCCCUGCUAGCCCAGCUGCCUGUGGACGUUGUGAUUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-54.70 kcal/mol

Ensemble Metrics

Free Energy: -58.89

Frequency: 0.0011

Diversity: 30.82

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((.(...(.((.(((((...))))).)))...).))))))(((((.....((((.((.((((..(((........))).........(((....(((((((((((.....)))).)))))))...)))..(((((........))))))))).)))))).....))..)))

Thermodynamic Ensemble Prediction

((((((.(...(,((.(((((...))))}.))).,.,.))))))(((,{.....((({,((.((((.(((......,...,,.........{|{,...(((((((((((.....)))).)))))))...,},..{||||........))))))))).)))))).....},..)))