Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DLGAP4_0003300

Sequence Length

250 nt

GC Content

0.4240

GCUGUGUGAGGCAUUGUGUAAUCAGCCAGGCUCUUUCCCGACCAUUGUUCUCCACCAACAGGCCUGGAAGUCGGAAGCCAGUGGAGUUCUCCCUGUUUCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUACUGGUUCCUAAAGCUACUGCAGGCAGAAACAGAGCGGCUGGAAGGCUGGUGCUGCCAGAUGGACAAGGAGACCAAAGAGAACAACCUCUCUGAAGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-49.80 kcal/mol

Ensemble Metrics

Free Energy: -54.43

Frequency: 0.0005

Diversity: 64.89

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((....(.((...)).)...))))(.((((((((...(.(((((...(..(((((....((((...((((((((((.((.(((....)))))))))).....................................................(((..((.....((....)).....))..)))..)))))...)))))))))..)...))))).))))))).))..(((((......)))))......)

Thermodynamic Ensemble Prediction

.(((..(((.(({...}))..)))..))).((((((..,({{..{{,{{(({,,{{,,,,||..,|||{||||{{{{.,{{.{||..,,)}))))))},......................................................((((((((...,({{,,,,.{((({...{,...({{{{....)))))}),))))),).)))...))))},))}.{||||,,,,..)))}})))).})