Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DLGAP4_0003400

Sequence Length

250 nt

GC Content

0.4360

GCUGUGUGAGGCAUUGUGUAAUCAGCCAGGCUCUUUCCCGACCAUUGUUCUCCACCAACAGGCCUGGAAGUCGGAAGCCAGUGGAGUUCUCCCUGUUUCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCAUUCAUUUACUUGAGUGCCAAGUGCUGUGCCAGGAGCCAGGGAGAGACUAGGGAACAAGAUUGACUUCCCUCCAGCUUGGAGUCCCCACCCAAGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-54.00 kcal/mol

Ensemble Metrics

Free Energy: -59.60

Frequency: 0.0001

Diversity: 42.63

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((....(.((...)).)...))))(.((.((((((((..........((((....((((((.(((......(((((.((.(((....)))))))))).....................................................((((((......))))))))).)).))))....))))...))))))))))((((((..........))))))...((((((.((....)))))))).)

Thermodynamic Ensemble Prediction

((((..,.,.((...}).)...))))(.((((...{,(((((.....,,,({{,((....))..}))),)))))}))))..,{{(((((((((((,{{{...................................................{.((((((......)))))),,....{({,...,.)})),))))))))},))(((((({,....,}..)))))),,.((((((.((....)))))))).)