Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DLGAP4_0003700

Sequence Length

205 nt

GC Content

0.4976

GUGGCACCUAACUCCCAGCCCUGGAGGCCGUGGCUAAAGAGCAGCUAAAUGCACUGGCUCUGGGAGGAAAGCCUGGGCUCAAAUUCUGGCUUUUCCACUUCCUGUCUGUGUAAUCCUGGGCUACUCACUUCUCUGAGCCUCAGGGGUUUUUUGUUUGUUUAUUUUUUCUCCUUGAAAUCAGAAUGGUAGGCCUGGUGAAGAGUUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-56.10 kcal/mol

Ensemble Metrics

Free Energy: -60.38

Frequency: 0.0010

Diversity: 51.22

Structure Visualization

Structure Prediction

MFE Structure Prediction

(......)((((((...(((....(((((...((((..(((.((((...(((((.(((...((((((((((((.(((......))).)))))))...))))).))).)))))......)))).))).....(((((...(((((((......((......))......)))))))..))))).)))).))))))))...))))))

Thermodynamic Ensemble Prediction

(......)((((((...(((....(((((,,,{({...{{{.{({{...(((((.(((...((((((((((((.(({......,)).)))))))),.})))).))).)))))...,,,)))).)}}{,,..(((((...(((((((......{,......},.....,}))))))..))))).,))).))))))))...))))))