Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DLGAP4_0004700

Sequence Length

531 nt

GC Content

0.5932

GUUCAUCAUGCCUAGUGGCGUAUAAGAAGACCCCGCCACCGGUCCCUCCACGCACCACUUCAAAGCCGUUCAUCUCAGUCACAGUCCAGAGCAGUACUGAGUCUGCCCAGGACACCUACCUGGACAGCCAGGACCACAAGAGCGAGGUGACUAGCCAGUCGGGCCUGAGCAACUCGUCGGACAGCCUGGACAGCAGUACCCGACCGCCCAGCGUGACACGGGGUGGAGUCGCCCCAGCCCCUGAGGCCCCAGAGCCACCCCCAAAACAUGCAGCUCUGAAAAGUGAACAAGGGACGCUGACCAGCUCUGAGUCCCACCCCGAGGCCGCCCCCAAAAGGAAACUGUCAUCGAUAGGAAUACAAGAGAGGACUAGAAGGAACGGUUCCCACCUCUCGGAGGACAACGGACCCAAAGCGAUCGAUGUGAUGGCACCCUCCUCAGAGUUGACUGCAUUCAGCCAGUGCCAAAAGAGGAGCCCAGUCCCGCUACCAAAUUCCAGUCCAUCGGGGUUCAGGUAGAGGACGACUGGCG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-164.90 kcal/mol

Ensemble Metrics

Free Energy: -173.94

Frequency: 0.0000

Diversity: 175.97

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.......))(..((((((.............)))))).(((((..................((((((((.(((.((((...((((.(.((((........)))).).)))).....(((((....)))))(((.(......).)))((((....))))((((..(.((..((((..(((((((.(((.((((.((.(((....((...(((((....(((((((..(((((.(((...))).)))....)).))))))).....))))).))((........))....))))))))).))))))....)))).....)))))))))))((....))...(((((...))))).............)))))))..))))))))....((((...)))).....)))))....((.(((.....))).))...((((((.......(((((.....).)))).......)))))).((((((((.(((((.((((((........))))))..))))).))..)))))).)

Thermodynamic Ensemble Prediction

({((.{,{((((..,,||||}....}}.||..,|||||,.((({({{{,..,,..........{(({((((.(((.{(((.,.((((,(.(({(,.{,,.,.|||}.|,||}}.,,..(((((....))))),{{....,..,|,|}}({((.{{,,}||{||||||,||..}}}||,||,|.|}||||.|,||}||.|||..,.||...(((((....(((((((..{{(((.(((...))).)))....}}.))))))).....))))).))}}))....},}.....|||||}|}|.,|}}}}},|.}))),.,,,|||||||,||,({....))...{((((...)}}})........{{{,||}}}}}}..}}}}}})),,..||||,,})})).....))}}}....((.(((,...,))).))...((((((....,,|(((({.....),,))).,.....)))))).{{{(((((.(((((.((((((........))))))..))))).)).,))))))})