Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DNAJC6_0000500

Sequence Length

250 nt

GC Content

0.3080

GACUGUGUGAGAAAUAAAUGACAUGACGAUUCUGGACUCUGCUGUGUUUAGCUGUGUGUCUCCUUUGGCAAGUCUCCUUGCCUCUCUGCCUCAUUUUUCUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCACUGAGAGAACAAUACAAUUGAUGAAGCAUUAUAUAUUUUUGGAAAAAUAUAUUGCAAAUGAAAAUGGAUCCCCACUGCUCUUAGGAUAAAAUCCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-32.41 kcal/mol

Ensemble Metrics

Free Energy: -37.30

Frequency: 0.0004

Diversity: 36.07

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.(((.(.((.......(((((.(((...((((((........)))))).))))))))......((((((....))))))(((((.....................................................................))))).((((...)))).....(((..(((((((((....)))))))))))).............)).)))).).))((.((((...)))).))

Thermodynamic Ensemble Prediction

(({.(((.(.{,.......(((((.(((...((((((.{....}.)))))).)))))))),,,...((((((....))))))(((((,,.............................................................,,...,)))},.{{,,...,}}}.....(((..(((((((({....))))))))))))..........}},,,.}))).).))((.((((...)))).))