Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DNAJC6_0001200

Sequence Length

250 nt

GC Content

0.3560

CAUAAGCAAAAUUAUAACCCCGCACACCGACUUGCAUGCAAUUAUCAUAGCCCGAGUGCUCCUCCGUUGAGAGACUUCGCCCCCGAGACCGCUGACUGUGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAUGACAGCUUUUUCUUCUUUCUGAUCCUUAUACUUUUUCCCCUUUGUCUCAUUGCACUAGCUAGGAUCUCUCUUAUAAUGUUGAAUAGAAGCAGUGAUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-20.01 kcal/mol

Ensemble Metrics

Free Energy: -25.30

Frequency: 0.0002

Diversity: 69.51

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.((..(((.(((((((....(((........)))........(((.((((...((((((((((....))).))..........(((((.((((.(.........................................................).))))....((........)).....................)))))...))))).)))).))).....))))))).)))..))...)((....))

Thermodynamic Ensemble Prediction

({,,.,{((.{,{{{{,....(({.......,}}},||{.....,,,,.||.,{(({,({,{{{....}|)|}|}||||.....((((..((((.{..,......................................................}.))))..,,}}..,.....||...,................,}|,||,,,||,|,,},|||}|},..,,}}},,,}.}}}..}},..)||}}}}})